Jonathan Arthur
Sesqui Lecturer in Bioinformatics,
Central Clinical School, Faculty of Medicine and SUBIT
Identification of open reading frames in unannotated genome sequences
Wednesday 24th August 14:05-14:55pm,
Carslaw Building Room 373.
Genome sequencing is
now routine with genomic data for over 1000 organisms in GenBank. While
important, the real value in genome sequencing comes from determining
the location and nature of the genes within the genome and the proteins
for which those genes code. Existing techniques for genome annotation
have varying levels of accuracy and depend on various assumptions and
hypotheses about the nature and location of open reading frames in the
DNA sequence. This talk will describe an alternative, hypothesis
independent method for annotating genome sequences using proteomic
data.
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